99.95 39355755 39355755 U 0 unclassified 0.05 18413 0 R 1 root 0.05 18413 0 R1 131567 cellular organisms 0.05 18413 1960 D 2759 Eukaryota 0.04 16453 1153 K 33090 Viridiplantae 0.04 15300 0 P 35493 Streptophyta 0.04 15300 0 P1 131221 Streptophytina 0.04 15300 1280 P2 3193 Embryophyta 0.04 14020 0 P3 58023 Tracheophyta 0.04 14020 0 P4 78536 Euphyllophyta 0.04 14020 0 P5 58024 Spermatophyta 0.04 14020 9067 C 3398 Magnoliopsida 0.01 4951 3938 C1 1437183 Mesangiospermae 0.00 669 0 C2 71240 eudicotyledons 0.00 669 0 C3 91827 Gunneridae 0.00 669 103 C4 1437201 Pentapetalae 0.00 297 10 C5 71275 rosids 0.00 151 0 C6 91836 malvids 0.00 81 0 O 41938 Malvales 0.00 81 0 F 3629 Malvaceae 0.00 81 0 F1 214907 Malvoideae 0.00 81 2 G 3633 Gossypium 0.00 79 79 S 29730 Gossypium raimondii 0.00 37 0 O 3699 Brassicales 0.00 37 4 F 3700 Brassicaceae 0.00 33 0 F1 981071 Brassiceae 0.00 33 8 G 3705 Brassica 0.00 25 0 S 3712 Brassica oleracea 0.00 25 25 S1 109376 Brassica oleracea var. oleracea 0.00 33 0 O 41937 Sapindales 0.00 33 0 F 23513 Rutaceae 0.00 33 0 F1 1728959 Aurantioideae 0.00 33 0 G 2706 Citrus 0.00 33 33 S 2711 Citrus sinensis 0.00 135 14 C6 91835 fabids 0.00 90 0 O 3646 Malpighiales 0.00 90 0 F 3977 Euphorbiaceae 0.00 90 0 F1 235631 Crotonoideae 0.00 89 0 F2 235882 Micrandreae 0.00 89 0 G 3980 Hevea 0.00 89 89 S 3981 Hevea brasiliensis 0.00 1 0 F2 235883 Manihoteae 0.00 1 0 G 3982 Manihot 0.00 1 1 S 3983 Manihot esculenta 0.00 20 0 O 72025 Fabales 0.00 20 0 F 3803 Fabaceae 0.00 20 0 F1 3814 Papilionoideae 0.00 20 0 F2 2231393 50 kb inversion clade 0.00 20 3 F3 2231382 NPAAA clade 0.00 16 0 F4 2233855 indigoferoid/millettioid clade 0.00 16 1 F5 163735 Phaseoleae 0.00 9 0 G 3820 Cajanus 0.00 9 9 S 3821 Cajanus cajan 0.00 4 0 G 3913 Vigna 0.00 4 0 S 157791 Vigna radiata 0.00 4 4 S1 3916 Vigna radiata var. radiata 0.00 2 0 G 3846 Glycine 0.00 2 2 G1 1462606 Glycine subgen. Soja 0.00 1 0 F4 2233838 Hologalegina 0.00 1 0 F5 2233839 IRL clade 0.00 1 0 F6 163742 Trifolieae 0.00 1 0 G 3877 Medicago 0.00 1 1 S 3880 Medicago truncatula 0.00 6 0 O 3502 Fagales 0.00 5 0 F 3503 Fagaceae 0.00 5 5 G 3511 Quercus 0.00 1 0 F 16714 Juglandaceae 0.00 1 0 G 16718 Juglans 0.00 1 1 S 51240 Juglans regia 0.00 3 0 O 3744 Rosales 0.00 3 0 F 3745 Rosaceae 0.00 3 0 F1 171637 Amygdaloideae 0.00 3 0 F2 721805 Amygdaleae 0.00 3 2 G 3754 Prunus 0.00 1 1 S 3755 Prunus dulcis 0.00 2 0 O 71239 Cucurbitales 0.00 2 0 F 3650 Cucurbitaceae 0.00 2 0 F1 1003877 Benincaseae 0.00 2 0 G 3655 Cucumis 0.00 2 2 S 3659 Cucumis sativus 0.00 1 0 C6 91834 rosids incertae sedis 0.00 1 0 O 403667 Vitales 0.00 1 0 F 3602 Vitaceae 0.00 1 0 F1 2304100 Viteae 0.00 1 0 G 3603 Vitis 0.00 1 1 S 29760 Vitis vinifera 0.00 268 1 C5 71274 asterids 0.00 137 0 C6 91882 campanulids 0.00 136 0 O 4036 Apiales 0.00 136 0 O1 364270 Apiineae 0.00 136 0 F 4037 Apiaceae 0.00 136 0 F1 241778 Apioideae 0.00 136 0 F2 241789 Scandiceae 0.00 136 0 F3 241799 Daucinae 0.00 136 0 G 4038 Daucus 0.00 136 0 G1 1873447 Daucus sect. Daucus 0.00 136 0 S 4039 Daucus carota 0.00 136 136 S1 79200 Daucus carota subsp. sativus 0.00 1 0 O 4209 Asterales 0.00 1 0 F 4210 Asteraceae 0.00 1 0 F1 219120 Cichorioideae 0.00 1 0 F2 219121 Cichorieae 0.00 1 0 F3 745062 Lactucinae 0.00 1 0 G 4235 Lactuca 0.00 1 1 S 4236 Lactuca sativa 0.00 130 1 C6 91888 lamiids 0.00 123 0 O 4069 Solanales 0.00 123 9 F 4070 Solanaceae 0.00 67 0 F1 424554 Nicotianoideae 0.00 67 0 F2 424562 Nicotianeae 0.00 67 0 G 4085 Nicotiana 0.00 67 67 S 49451 Nicotiana attenuata 0.00 47 0 F1 424551 Solanoideae 0.00 29 0 F2 424574 Solaneae 0.00 29 0 G 4107 Solanum 0.00 29 1 G1 49274 Solanum subgen. Lycopersicon 0.00 18 18 S 28526 Solanum pennellii 0.00 10 10 S 4081 Solanum lycopersicum 0.00 18 0 F2 424564 Capsiceae 0.00 18 0 G 4071 Capsicum 0.00 18 18 S 4072 Capsicum annuum 0.00 5 0 O 4143 Lamiales 0.00 4 0 F 4144 Oleaceae 0.00 4 0 F1 426106 Oleeae 0.00 4 0 G 4145 Olea 0.00 4 0 S 4146 Olea europaea 0.00 4 0 S1 158383 Olea europaea subsp. europaea 0.00 4 4 S2 158386 Olea europaea var. sylvestris 0.00 1 0 F 4180 Pedaliaceae 0.00 1 0 G 4181 Sesamum 0.00 1 1 S 4182 Sesamum indicum 0.00 1 0 O 4055 Gentianales 0.00 1 0 F 24966 Rubiaceae 0.00 1 0 F1 169618 Ixoroideae 0.00 1 0 F2 1968429 Gardenieae complex 0.00 1 0 F3 1968428 Bertiereae - Coffeeae clade 0.00 1 0 F4 169640 Coffeeae 0.00 1 0 G 13442 Coffea 0.00 1 1 S 49369 Coffea eugenioides 0.00 1 0 O 41947 Santalales 0.00 1 0 F 1003242 Ximeniaceae 0.00 1 0 G 397391 Malania 0.00 1 1 S 397392 Malania oleifera 0.00 202 0 C2 4447 Liliopsida 0.00 202 2 C3 1437197 Petrosaviidae 0.00 197 25 C4 4734 commelinids 0.00 168 2 O 38820 Poales 0.00 126 2 F 4479 Poaceae 0.00 109 0 F1 359160 BOP clade 0.00 109 5 F2 147368 Pooideae 0.00 83 0 F3 1648038 Triticodae 0.00 83 12 F4 147389 Triticeae 0.00 64 39 F5 1648030 Triticinae 0.00 25 25 G 4564 Triticum 0.00 7 0 F5 1648017 Hordeinae 0.00 7 0 G 4512 Hordeum 0.00 7 0 S 4513 Hordeum vulgare 0.00 7 7 S1 112509 Hordeum vulgare subsp. vulgare 0.00 20 0 F3 1648037 Poodae 0.00 20 0 F4 147387 Poeae 0.00 20 0 F5 1652081 Poeae Chloroplast Group 2 (Poeae type) 0.00 20 0 F6 2948571 Loliodinae 0.00 20 0 F7 640630 Loliinae 0.00 20 19 G 4520 Lolium 0.00 1 1 S 89674 Lolium rigidum 0.00 1 0 F3 2822797 Stipodae 0.00 1 0 F4 147385 Brachypodieae 0.00 1 0 G 15367 Brachypodium 0.00 1 1 S 15368 Brachypodium distachyon 0.00 15 0 F1 147370 PACMAD clade 0.00 15 1 F2 147369 Panicoideae 0.00 13 0 F3 1648033 Andropogonodae 0.00 13 0 F4 147429 Andropogoneae 0.00 13 0 F5 1648029 Tripsacinae 0.00 13 0 G 4575 Zea 0.00 13 13 S 4577 Zea mays 0.00 1 0 F3 1648036 Panicodae 0.00 1 0 F4 147428 Paniceae 0.00 1 0 F5 1293365 Panicinae 0.00 1 0 G 4539 Panicum 0.00 1 0 G1 2100772 Panicum sect. Panicum 0.00 1 1 S 206008 Panicum hallii 0.00 40 0 F 4613 Bromeliaceae 0.00 40 0 F1 1909378 Bromelioideae 0.00 40 0 G 4614 Ananas 0.00 40 40 S 4615 Ananas comosus 0.00 2 0 O 4618 Zingiberales 0.00 1 0 F 4637 Musaceae 0.00 1 0 G 4640 Musa 0.00 1 0 S 4641 Musa acuminata 0.00 1 1 S1 214687 Musa acuminata subsp. malaccensis 0.00 1 0 F 4642 Zingiberaceae 0.00 1 0 G 4650 Zingiber 0.00 1 1 S 94328 Zingiber officinale 0.00 2 0 O 40551 Arecales 0.00 2 0 F 4710 Arecaceae 0.00 2 0 F1 169697 Arecoideae 0.00 2 0 F2 169705 Cocoseae 0.00 2 0 F3 169729 Elaeidinae 0.00 2 0 G 51952 Elaeis 0.00 2 2 S 51953 Elaeis guineensis 0.00 2 0 O 73496 Asparagales 0.00 2 0 F 40552 Asparagaceae 0.00 2 0 F1 703533 Asparagoideae 0.00 2 0 G 4685 Asparagus 0.00 2 2 S 4686 Asparagus officinalis 0.00 1 0 O 40548 Dioscoreales 0.00 1 0 F 4671 Dioscoreaceae 0.00 1 0 G 4672 Dioscorea 0.00 1 0 S 29710 Dioscorea cayenensis 0.00 1 1 S1 55577 Dioscorea cayenensis subsp. rotundata 0.00 141 0 C2 232347 Magnoliidae 0.00 141 0 O 3400 Magnoliales 0.00 141 0 F 3401 Magnoliaceae 0.00 141 0 G 3402 Magnolia 0.00 141 141 S 86752 Magnolia sinica 0.00 1 0 O 232378 Proteales 0.00 1 0 F 4328 Proteaceae 0.00 1 0 G 4329 Macadamia 0.00 1 1 S 60698 Macadamia integrifolia 0.00 2 0 O 261007 Nymphaeales 0.00 2 0 F 4410 Nymphaeaceae 0.00 2 0 G 4418 Nymphaea 0.00 2 2 S 210225 Nymphaea colorata