99.99 38523098 38523098 U 0 unclassified 0.01 5486 0 R 1 root 0.01 5486 0 R1 131567 cellular organisms 0.01 5486 74 D 2759 Eukaryota 0.01 5412 925 K 33090 Viridiplantae 0.01 4475 0 P 35493 Streptophyta 0.01 4475 0 P1 131221 Streptophytina 0.01 4475 1003 P2 3193 Embryophyta 0.01 3472 0 P3 58023 Tracheophyta 0.01 3472 0 P4 78536 Euphyllophyta 0.01 3472 0 P5 58024 Spermatophyta 0.01 3472 203 C 3398 Magnoliopsida 0.01 3269 1308 C1 1437183 Mesangiospermae 0.00 1524 0 C2 4447 Liliopsida 0.00 1524 7 C3 1437197 Petrosaviidae 0.00 1516 15 C4 4734 commelinids 0.00 1498 5 O 38820 Poales 0.00 1492 162 F 4479 Poaceae 0.00 1328 24 F1 359160 BOP clade 0.00 1300 581 F2 147368 Pooideae 0.00 695 0 F3 1648037 Poodae 0.00 695 0 F4 147387 Poeae 0.00 695 0 F5 1652081 Poeae Chloroplast Group 2 (Poeae type) 0.00 695 0 F6 2948571 Loliodinae 0.00 695 0 F7 640630 Loliinae 0.00 695 675 G 4520 Lolium 0.00 13 13 S 4522 Lolium perenne 0.00 7 7 S 89674 Lolium rigidum 0.00 24 0 F3 1648038 Triticodae 0.00 24 18 F4 147389 Triticeae 0.00 3 0 F5 1648017 Hordeinae 0.00 3 0 G 4512 Hordeum 0.00 3 0 S 4513 Hordeum vulgare 0.00 3 3 S1 112509 Hordeum vulgare subsp. vulgare 0.00 3 3 F5 1648030 Triticinae 0.00 4 0 F2 147367 Oryzoideae 0.00 4 0 F3 147380 Oryzeae 0.00 4 0 F4 1648021 Oryzinae 0.00 4 3 G 4527 Oryza 0.00 1 1 S 4538 Oryza glaberrima 0.00 2 0 F1 147370 PACMAD clade 0.00 2 1 F2 147369 Panicoideae 0.00 1 0 F3 1648036 Panicodae 0.00 1 0 F4 147428 Paniceae 0.00 1 0 F5 1293361 Cenchrinae 0.00 1 0 G 4554 Setaria 0.00 1 1 S 4556 Setaria viridis 0.00 1 0 F 4613 Bromeliaceae 0.00 1 0 F1 1909378 Bromelioideae 0.00 1 0 G 4614 Ananas 0.00 1 1 S 4615 Ananas comosus 0.00 2 0 O 40551 Arecales 0.00 2 0 F 4710 Arecaceae 0.00 2 0 F1 169700 Coryphoideae 0.00 2 0 F2 169748 Phoeniceae 0.00 2 0 G 4719 Phoenix 0.00 2 2 S 42345 Phoenix dactylifera 0.00 1 0 O 4618 Zingiberales 0.00 1 0 F 4642 Zingiberaceae 0.00 1 0 G 4650 Zingiber 0.00 1 1 S 94328 Zingiber officinale 0.00 1 0 O 73496 Asparagales 0.00 1 0 F 40552 Asparagaceae 0.00 1 0 F1 703533 Asparagoideae 0.00 1 0 G 4685 Asparagus 0.00 1 1 S 4686 Asparagus officinalis 0.00 415 0 C2 71240 eudicotyledons 0.00 415 0 C3 91827 Gunneridae 0.00 415 137 C4 1437201 Pentapetalae 0.00 211 66 C5 71275 rosids 0.00 132 30 C6 91835 fabids 0.00 84 0 O 72025 Fabales 0.00 84 0 F 3803 Fabaceae 0.00 84 0 F1 3814 Papilionoideae 0.00 84 2 F2 2231393 50 kb inversion clade 0.00 76 7 F3 2231382 NPAAA clade 0.00 67 0 F4 2233855 indigoferoid/millettioid clade 0.00 67 0 F5 163735 Phaseoleae 0.00 59 0 G 3913 Vigna 0.00 56 0 S 157791 Vigna radiata 0.00 56 56 S1 3916 Vigna radiata var. radiata 0.00 3 3 S 3917 Vigna unguiculata 0.00 5 0 G 3820 Cajanus 0.00 5 5 S 3821 Cajanus cajan 0.00 3 0 G 3846 Glycine 0.00 3 2 G1 1462606 Glycine subgen. Soja 0.00 1 1 S 3848 Glycine soja 0.00 2 0 F4 2233838 Hologalegina 0.00 1 0 F5 2233839 IRL clade 0.00 1 0 F6 163742 Trifolieae 0.00 1 0 G 3898 Trifolium 0.00 1 1 S 57577 Trifolium pratense 0.00 1 0 F5 2233857 robinioid clade 0.00 1 0 F6 163747 Loteae 0.00 1 0 G 3867 Lotus 0.00 1 1 S 34305 Lotus japonicus 0.00 6 0 F3 2231387 dalbergioids sensu lato 0.00 6 0 F4 163725 Dalbergieae 0.00 6 0 F5 2231390 Pterocarpus clade 0.00 6 0 G 3817 Arachis 0.00 4 4 S 217475 Arachis stenosperma 0.00 1 1 S 3818 Arachis hypogaea 0.00 1 1 S 130453 Arachis duranensis 0.00 7 0 O 3744 Rosales 0.00 7 0 F 3745 Rosaceae 0.00 5 0 F1 171637 Amygdaloideae 0.00 3 0 F2 721813 Maleae 0.00 3 1 G 3749 Malus 0.00 2 2 S 3750 Malus domestica 0.00 2 0 F2 721805 Amygdaleae 0.00 2 0 G 3754 Prunus 0.00 1 1 S 3755 Prunus dulcis 0.00 1 1 S 102107 Prunus mume 0.00 2 1 F1 171638 Rosoideae 0.00 1 0 F2 721789 Potentilleae 0.00 1 0 F3 1184124 Fragariinae 0.00 1 0 G 3746 Fragaria 0.00 1 0 S 57918 Fragaria vesca 0.00 1 1 S1 101020 Fragaria vesca subsp. vesca 0.00 7 0 O 71239 Cucurbitales 0.00 7 0 F 3650 Cucurbitaceae 0.00 4 2 F1 1003877 Benincaseae 0.00 2 0 G 3655 Cucumis 0.00 2 2 S 3659 Cucumis sativus 0.00 3 0 F1 1003878 Cucurbiteae 0.00 3 0 G 3660 Cucurbita 0.00 3 0 S 3663 Cucurbita pepo 0.00 3 3 S1 3664 Cucurbita pepo subsp. pepo 0.00 4 0 O 3646 Malpighiales 0.00 4 0 F 3977 Euphorbiaceae 0.00 3 0 F1 235631 Crotonoideae 0.00 3 0 F2 235882 Micrandreae 0.00 3 0 G 3980 Hevea 0.00 3 3 S 3981 Hevea brasiliensis 0.00 1 0 F1 235629 Acalyphoideae 0.00 1 0 F2 235880 Acalypheae 0.00 1 0 G 3984 Mercurialis 0.00 1 1 S 3986 Mercurialis annua 0.00 8 0 C6 91834 rosids incertae sedis 0.00 8 0 O 403667 Vitales 0.00 8 0 F 3602 Vitaceae 0.00 8 0 F1 2304100 Viteae 0.00 8 5 G 3603 Vitis 0.00 2 2 S 29760 Vitis vinifera 0.00 1 1 S 96939 Vitis riparia 0.00 5 0 C6 91836 malvids 0.00 4 0 O 3699 Brassicales 0.00 4 0 F 3700 Brassicaceae 0.00 3 0 F1 980083 Camelineae 0.00 3 0 G 71323 Camelina 0.00 3 3 S 90675 Camelina sativa 0.00 1 0 F1 981071 Brassiceae 0.00 1 0 G 3705 Brassica 0.00 1 0 S 3712 Brassica oleracea 0.00 1 1 S1 109376 Brassica oleracea var. oleracea 0.00 1 0 O 41938 Malvales 0.00 1 0 F 3629 Malvaceae 0.00 1 0 F1 214907 Malvoideae 0.00 1 0 G 3633 Gossypium 0.00 1 1 S 3635 Gossypium hirsutum 0.00 64 9 C5 71274 asterids 0.00 36 0 C6 91882 campanulids 0.00 28 0 O 4209 Asterales 0.00 28 21 F 4210 Asteraceae 0.00 6 0 F1 219120 Cichorioideae 0.00 6 0 F2 219121 Cichorieae 0.00 6 0 F3 745062 Lactucinae 0.00 6 0 G 4235 Lactuca 0.00 6 6 S 4236 Lactuca sativa 0.00 1 0 F1 102804 Asteroideae 0.00 1 0 F2 102809 Astereae 0.00 1 0 F3 877976 North American clade 0.00 1 0 F4 2841728 Conyzinae 0.00 1 0 G 41574 Erigeron 0.00 1 1 S 72917 Erigeron canadensis 0.00 8 0 O 4036 Apiales 0.00 8 0 O1 364270 Apiineae 0.00 8 0 F 4037 Apiaceae 0.00 8 0 F1 241778 Apioideae 0.00 8 0 F2 241789 Scandiceae 0.00 8 0 F3 241799 Daucinae 0.00 8 0 G 4038 Daucus 0.00 8 0 G1 1873447 Daucus sect. Daucus 0.00 8 0 S 4039 Daucus carota 0.00 8 8 S1 79200 Daucus carota subsp. sativus 0.00 16 4 C6 91888 lamiids 0.00 5 0 O 4069 Solanales 0.00 3 0 F 4118 Convolvulaceae 0.00 3 0 F1 267213 Ipomoeeae 0.00 3 0 G 4119 Ipomoea 0.00 3 3 S 35885 Ipomoea triloba 0.00 2 0 F 4070 Solanaceae 0.00 1 0 F1 424551 Solanoideae 0.00 1 0 F2 424574 Solaneae 0.00 1 0 G 4107 Solanum 0.00 1 1 S 45834 Solanum dulcamara 0.00 1 0 F1 424554 Nicotianoideae 0.00 1 0 F2 424562 Nicotianeae 0.00 1 0 G 4085 Nicotiana 0.00 1 1 S 49451 Nicotiana attenuata 0.00 4 2 O 4143 Lamiales 0.00 2 0 F 4136 Lamiaceae 0.00 2 0 F1 216706 Nepetoideae 0.00 2 0 F2 216718 Mentheae 0.00 2 0 F3 2836339 Salviinae 0.00 2 0 G 21880 Salvia 0.00 1 0 G1 2026555 Salvia subgen. Calosphace 0.00 1 0 G2 2026556 core Calosphace 0.00 1 1 S 180675 Salvia splendens 0.00 1 0 G1 2291027 Salvia incertae sedis 0.00 1 1 S 226208 Salvia miltiorrhiza 0.00 3 0 O 4055 Gentianales 0.00 3 0 F 24966 Rubiaceae 0.00 3 0 F1 169618 Ixoroideae 0.00 3 0 F2 1968429 Gardenieae complex 0.00 3 0 F3 1968428 Bertiereae - Coffeeae clade 0.00 3 0 F4 169640 Coffeeae 0.00 3 2 G 13442 Coffea 0.00 1 1 S 49369 Coffea eugenioides 0.00 3 0 O 41945 Ericales 0.00 1 0 F 4345 Ericaceae 0.00 1 0 F1 217035 Ericoideae 0.00 1 0 F2 217046 Rhodoreae 0.00 1 0 G 4346 Rhododendron 0.00 1 1 S 182163 Rhododendron vialii 0.00 1 0 F 19955 Ebenaceae 0.00 1 0 G 13492 Diospyros 0.00 1 1 S 55363 Diospyros lotus 0.00 1 0 F 25692 Balsaminaceae 0.00 1 0 G 35939 Impatiens 0.00 1 1 S 253017 Impatiens glandulifera 0.00 3 0 O 3524 Caryophyllales 0.00 2 0 F 1804623 Chenopodiaceae 0.00 2 0 F1 1804621 Betoideae 0.00 2 0 G 3554 Beta 0.00 2 0 S 161934 Beta vulgaris 0.00 2 2 S1 3555 Beta vulgaris subsp. vulgaris 0.00 1 0 F 3563 Amaranthaceae 0.00 1 0 G 3564 Amaranthus 0.00 1 1 S 29722 Amaranthus tricolor 0.00 19 0 O 232378 Proteales 0.00 19 0 F 4328 Proteaceae 0.00 14 0 G 4329 Macadamia 0.00 14 14 S 60698 Macadamia integrifolia 0.00 5 0 G 54954 Telopea 0.00 5 5 S 54955 Telopea speciosissima 0.00 3 0 C2 232347 Magnoliidae 0.00 3 0 O 3400 Magnoliales 0.00 3 0 F 3401 Magnoliaceae 0.00 3 0 G 3402 Magnolia 0.00 3 3 S 86752 Magnolia sinica 0.00 12 4 P 3041 Chlorophyta 0.00 7 0 P1 2692248 core chlorophytes 0.00 7 0 C 3166 Chlorophyceae 0.00 7 0 C1 2812636 CS clade 0.00 7 0 O 3042 Chlamydomonadales 0.00 7 0 F 3051 Chlamydomonadaceae 0.00 7 0 G 3052 Chlamydomonas 0.00 7 7 S 3055 Chlamydomonas reinhardtii 0.00 1 0 C 1035538 Mamiellophyceae 0.00 1 0 O 13792 Mamiellales 0.00 1 0 F 1525212 Bathycoccaceae 0.00 1 0 G 70447 Ostreococcus 0.00 1 0 G1 2268852 unclassified Ostreococcus 0.00 1 0 S 242159 Ostreococcus sp. 'lucimarinus' 0.00 1 1 S1 436017 Ostreococcus lucimarinus CCE9901