99.98 34360120 34360120 U 0 unclassified 0.02 6014 0 R 1 root 0.02 6014 0 R1 131567 cellular organisms 0.02 6014 166 D 2759 Eukaryota 0.02 5848 757 K 33090 Viridiplantae 0.01 5084 0 P 35493 Streptophyta 0.01 5084 0 P1 131221 Streptophytina 0.01 5084 744 P2 3193 Embryophyta 0.01 4340 0 P3 58023 Tracheophyta 0.01 4340 0 P4 78536 Euphyllophyta 0.01 4340 0 P5 58024 Spermatophyta 0.01 4340 516 C 3398 Magnoliopsida 0.01 3824 1891 C1 1437183 Mesangiospermae 0.00 988 0 C2 4447 Liliopsida 0.00 988 4 C3 1437197 Petrosaviidae 0.00 983 12 C4 4734 commelinids 0.00 964 2 O 38820 Poales 0.00 959 99 F 4479 Poaceae 0.00 856 18 F1 359160 BOP clade 0.00 835 338 F2 147368 Pooideae 0.00 477 0 F3 1648037 Poodae 0.00 477 0 F4 147387 Poeae 0.00 477 0 F5 1652081 Poeae Chloroplast Group 2 (Poeae type) 0.00 477 0 F6 2948571 Loliodinae 0.00 477 0 F7 640630 Loliinae 0.00 477 471 G 4520 Lolium 0.00 5 5 S 4522 Lolium perenne 0.00 1 1 S 89674 Lolium rigidum 0.00 17 0 F3 1648038 Triticodae 0.00 17 10 F4 147389 Triticeae 0.00 5 2 F5 1648030 Triticinae 0.00 3 1 G 4564 Triticum 0.00 2 2 S 4565 Triticum aestivum 0.00 2 0 F5 1648017 Hordeinae 0.00 2 0 G 4512 Hordeum 0.00 2 0 S 4513 Hordeum vulgare 0.00 2 2 S1 112509 Hordeum vulgare subsp. vulgare 0.00 3 0 F3 2822797 Stipodae 0.00 3 0 F4 147385 Brachypodieae 0.00 3 0 G 15367 Brachypodium 0.00 3 3 S 15368 Brachypodium distachyon 0.00 3 0 F2 147367 Oryzoideae 0.00 3 0 F3 147380 Oryzeae 0.00 3 0 F4 1648021 Oryzinae 0.00 3 0 G 4527 Oryza 0.00 2 2 S 4538 Oryza glaberrima 0.00 1 0 S 4530 Oryza sativa 0.00 1 1 S1 39947 Oryza sativa Japonica Group 0.00 4 0 F1 147370 PACMAD clade 0.00 4 4 F2 147369 Panicoideae 0.00 3 0 F 4613 Bromeliaceae 0.00 3 0 F1 1909378 Bromelioideae 0.00 3 0 G 4614 Ananas 0.00 3 3 S 4615 Ananas comosus 0.00 5 0 O 4618 Zingiberales 0.00 4 0 F 4642 Zingiberaceae 0.00 4 0 G 4650 Zingiber 0.00 4 4 S 94328 Zingiber officinale 0.00 1 0 F 4637 Musaceae 0.00 1 0 G 4640 Musa 0.00 1 0 S 4641 Musa acuminata 0.00 1 1 S1 214687 Musa acuminata subsp. malaccensis 0.00 2 0 O 40551 Arecales 0.00 2 0 F 4710 Arecaceae 0.00 2 0 F1 169697 Arecoideae 0.00 2 0 F2 169705 Cocoseae 0.00 2 0 F3 169729 Elaeidinae 0.00 2 0 G 51952 Elaeis 0.00 2 2 S 51953 Elaeis guineensis 0.00 1 0 O 73496 Asparagales 0.00 1 0 F 40552 Asparagaceae 0.00 1 0 F1 703533 Asparagoideae 0.00 1 0 G 4685 Asparagus 0.00 1 1 S 4686 Asparagus officinalis 0.00 931 0 C2 71240 eudicotyledons 0.00 931 0 C3 91827 Gunneridae 0.00 931 411 C4 1437201 Pentapetalae 0.00 358 34 C5 71274 asterids 0.00 303 16 C6 91882 campanulids 0.00 227 0 O 4036 Apiales 0.00 227 0 O1 364270 Apiineae 0.00 227 0 F 4037 Apiaceae 0.00 227 0 F1 241778 Apioideae 0.00 227 0 F2 241789 Scandiceae 0.00 227 0 F3 241799 Daucinae 0.00 227 0 G 4038 Daucus 0.00 227 0 G1 1873447 Daucus sect. Daucus 0.00 227 0 S 4039 Daucus carota 0.00 227 227 S1 79200 Daucus carota subsp. sativus 0.00 60 0 O 4209 Asterales 0.00 60 22 F 4210 Asteraceae 0.00 34 0 F1 219120 Cichorioideae 0.00 34 0 F2 219121 Cichorieae 0.00 34 0 F3 745062 Lactucinae 0.00 34 0 G 4235 Lactuca 0.00 34 34 S 4236 Lactuca sativa 0.00 2 0 F1 102804 Asteroideae 0.00 2 0 F2 911341 Heliantheae alliance 0.00 2 0 F3 102814 Heliantheae 0.00 2 0 G 4231 Helianthus 0.00 2 2 S 4232 Helianthus annuus 0.00 2 0 F1 219103 Carduoideae 0.00 2 0 F2 102818 Cardueae 0.00 2 0 F3 742010 Carduinae 0.00 2 0 G 4264 Cynara 0.00 2 0 S 4265 Cynara cardunculus 0.00 2 0 S1 309979 Cynara cardunculus subsp. cardunculus 0.00 2 2 S2 59895 Cynara cardunculus var. scolymus 0.00 19 1 C6 91888 lamiids 0.00 14 0 O 4143 Lamiales 0.00 10 0 F 4144 Oleaceae 0.00 10 0 F1 426106 Oleeae 0.00 10 0 G 4145 Olea 0.00 10 0 S 4146 Olea europaea 0.00 10 0 S1 158383 Olea europaea subsp. europaea 0.00 10 10 S2 158386 Olea europaea var. sylvestris 0.00 4 0 F 4136 Lamiaceae 0.00 4 0 F1 216706 Nepetoideae 0.00 4 0 F2 216718 Mentheae 0.00 4 0 F3 2836339 Salviinae 0.00 4 0 G 21880 Salvia 0.00 3 0 G1 2026555 Salvia subgen. Calosphace 0.00 3 0 G2 2026556 core Calosphace 0.00 3 3 S 180675 Salvia splendens 0.00 1 0 G1 2291027 Salvia incertae sedis 0.00 1 1 S 226208 Salvia miltiorrhiza 0.00 3 0 O 4069 Solanales 0.00 2 0 F 4070 Solanaceae 0.00 1 0 F1 424551 Solanoideae 0.00 1 0 F2 424564 Capsiceae 0.00 1 0 G 4071 Capsicum 0.00 1 1 S 4072 Capsicum annuum 0.00 1 0 F1 424554 Nicotianoideae 0.00 1 0 F2 424562 Nicotianeae 0.00 1 0 G 4085 Nicotiana 0.00 1 1 S 49451 Nicotiana attenuata 0.00 1 0 F 4118 Convolvulaceae 0.00 1 0 F1 267213 Ipomoeeae 0.00 1 0 G 4119 Ipomoea 0.00 1 1 S 35885 Ipomoea triloba 0.00 1 0 O 4055 Gentianales 0.00 1 0 F 24966 Rubiaceae 0.00 1 0 F1 169618 Ixoroideae 0.00 1 0 F2 1968429 Gardenieae complex 0.00 1 0 F3 1968428 Bertiereae - Coffeeae clade 0.00 1 0 F4 169640 Coffeeae 0.00 1 1 G 13442 Coffea 0.00 2 0 O 41945 Ericales 0.00 2 0 F 25692 Balsaminaceae 0.00 2 0 G 35939 Impatiens 0.00 2 2 S 253017 Impatiens glandulifera 0.00 161 54 C5 71275 rosids 0.00 93 11 C6 91835 fabids 0.00 57 0 O 72025 Fabales 0.00 57 0 F 3803 Fabaceae 0.00 57 0 F1 3814 Papilionoideae 0.00 57 0 F2 2231393 50 kb inversion clade 0.00 53 3 F3 2231382 NPAAA clade 0.00 49 0 F4 2233855 indigoferoid/millettioid clade 0.00 49 0 F5 163735 Phaseoleae 0.00 42 0 G 3913 Vigna 0.00 35 0 S 157791 Vigna radiata 0.00 35 35 S1 3916 Vigna radiata var. radiata 0.00 4 4 S 3917 Vigna unguiculata 0.00 3 3 S 3914 Vigna angularis 0.00 4 0 G 3820 Cajanus 0.00 4 4 S 3821 Cajanus cajan 0.00 2 0 G 3883 Phaseolus 0.00 2 2 S 3885 Phaseolus vulgaris 0.00 1 0 G 3846 Glycine 0.00 1 0 G1 1462606 Glycine subgen. Soja 0.00 1 1 S 3848 Glycine soja 0.00 1 0 F4 2233838 Hologalegina 0.00 1 0 F5 2233839 IRL clade 0.00 1 0 F6 163722 Cicereae 0.00 1 0 G 3826 Cicer 0.00 1 1 S 3827 Cicer arietinum 0.00 4 0 F3 2231387 dalbergioids sensu lato 0.00 4 0 F4 163725 Dalbergieae 0.00 4 0 F5 2231390 Pterocarpus clade 0.00 4 0 G 3817 Arachis 0.00 4 4 S 3818 Arachis hypogaea 0.00 11 0 O 3744 Rosales 0.00 8 0 F 3745 Rosaceae 0.00 7 3 F1 171637 Amygdaloideae 0.00 2 0 F2 721805 Amygdaleae 0.00 2 1 G 3754 Prunus 0.00 1 1 S 102107 Prunus mume 0.00 2 0 F2 721813 Maleae 0.00 2 0 G 3749 Malus 0.00 2 2 S 3752 Malus sylvestris 0.00 1 0 F1 171638 Rosoideae 0.00 1 0 F2 721789 Potentilleae 0.00 1 0 F3 1184124 Fragariinae 0.00 1 0 G 3746 Fragaria 0.00 1 0 S 57918 Fragaria vesca 0.00 1 1 S1 101020 Fragaria vesca subsp. vesca 0.00 3 0 F 3608 Rhamnaceae 0.00 3 0 F1 325284 Paliureae 0.00 3 0 G 72171 Ziziphus 0.00 3 0 S 326968 Ziziphus jujuba 0.00 3 3 S1 714518 Ziziphus jujuba var. spinosa 0.00 7 0 O 3646 Malpighiales 0.00 7 0 F 3977 Euphorbiaceae 0.00 6 0 F1 235631 Crotonoideae 0.00 5 0 F2 235882 Micrandreae 0.00 5 0 G 3980 Hevea 0.00 5 5 S 3981 Hevea brasiliensis 0.00 1 0 F2 235883 Manihoteae 0.00 1 0 G 3982 Manihot 0.00 1 1 S 3983 Manihot esculenta 0.00 1 0 F1 235629 Acalyphoideae 0.00 1 0 F2 235880 Acalypheae 0.00 1 0 G 3987 Ricinus 0.00 1 1 S 3988 Ricinus communis 0.00 7 0 O 71239 Cucurbitales 0.00 7 1 F 3650 Cucurbitaceae 0.00 3 0 F1 1003877 Benincaseae 0.00 3 0 G 3655 Cucumis 0.00 3 3 S 3659 Cucumis sativus 0.00 3 0 F1 1003878 Cucurbiteae 0.00 3 0 G 3660 Cucurbita 0.00 3 0 S 3663 Cucurbita pepo 0.00 3 3 S1 3664 Cucurbita pepo subsp. pepo 0.00 10 0 C6 91836 malvids 0.00 5 0 O 3699 Brassicales 0.00 5 0 F 3700 Brassicaceae 0.00 3 0 F1 980083 Camelineae 0.00 2 0 G 71323 Camelina 0.00 2 2 S 90675 Camelina sativa 0.00 1 0 G 3701 Arabidopsis 0.00 1 1 S 3702 Arabidopsis thaliana 0.00 2 0 F1 981071 Brassiceae 0.00 2 2 G 3705 Brassica 0.00 5 0 O 41938 Malvales 0.00 5 0 F 3629 Malvaceae 0.00 5 0 F1 214907 Malvoideae 0.00 5 0 G 3633 Gossypium 0.00 3 3 S 3635 Gossypium hirsutum 0.00 2 2 S 29730 Gossypium raimondii 0.00 4 0 C6 91834 rosids incertae sedis 0.00 4 0 O 403667 Vitales 0.00 4 0 F 3602 Vitaceae 0.00 4 0 F1 2304100 Viteae 0.00 4 0 G 3603 Vitis 0.00 2 2 S 29760 Vitis vinifera 0.00 2 2 S 96939 Vitis riparia 0.00 1 0 O 3524 Caryophyllales 0.00 1 0 F 1804623 Chenopodiaceae 0.00 1 0 F1 1307796 Chenopodioideae 0.00 1 0 F2 1307775 Anserineae 0.00 1 0 G 3561 Spinacia 0.00 1 1 S 3562 Spinacia oleracea 0.00 7 0 O 232378 Proteales 0.00 7 2 F 4328 Proteaceae 0.00 4 0 G 4329 Macadamia 0.00 4 4 S 60698 Macadamia integrifolia 0.00 1 0 G 54954 Telopea 0.00 1 1 S 54955 Telopea speciosissima 0.00 5 0 C2 232347 Magnoliidae 0.00 5 0 O 3400 Magnoliales 0.00 5 0 F 3401 Magnoliaceae 0.00 5 0 G 3402 Magnolia 0.00 5 5 S 86752 Magnolia sinica 0.00 2 0 O 41768 Ranunculales 0.00 2 0 F 3465 Papaveraceae 0.00 2 0 F1 1462614 Papaveroideae 0.00 2 0 G 3468 Papaver 0.00 2 2 S 3469 Papaver somniferum 0.00 7 3 P 3041 Chlorophyta 0.00 4 0 P1 2692248 core chlorophytes 0.00 4 0 C 3166 Chlorophyceae 0.00 4 0 C1 2812636 CS clade 0.00 4 0 O 3042 Chlamydomonadales 0.00 4 0 F 3051 Chlamydomonadaceae 0.00 4 0 G 3052 Chlamydomonas 0.00 4 4 S 3055 Chlamydomonas reinhardtii