99.99 37846556 37846556 U 0 unclassified 0.01 3808 0 R 1 root 0.01 3808 0 R1 131567 cellular organisms 0.01 3808 110 D 2759 Eukaryota 0.01 3698 700 K 33090 Viridiplantae 0.01 2978 0 P 35493 Streptophyta 0.01 2978 0 P1 131221 Streptophytina 0.01 2978 742 P2 3193 Embryophyta 0.01 2234 0 P3 58023 Tracheophyta 0.01 2234 0 P4 78536 Euphyllophyta 0.01 2234 0 P5 58024 Spermatophyta 0.01 2234 252 C 3398 Magnoliopsida 0.01 1982 866 C1 1437183 Mesangiospermae 0.00 750 0 C2 4447 Liliopsida 0.00 750 1 C3 1437197 Petrosaviidae 0.00 745 12 C4 4734 commelinids 0.00 730 1 O 38820 Poales 0.00 729 107 F 4479 Poaceae 0.00 618 11 F1 359160 BOP clade 0.00 605 288 F2 147368 Pooideae 0.00 269 0 F3 1648037 Poodae 0.00 269 0 F4 147387 Poeae 0.00 269 0 F5 1652081 Poeae Chloroplast Group 2 (Poeae type) 0.00 269 0 F6 2948571 Loliodinae 0.00 269 0 F7 640630 Loliinae 0.00 269 264 G 4520 Lolium 0.00 3 3 S 89674 Lolium rigidum 0.00 2 2 S 4522 Lolium perenne 0.00 48 0 F3 1648038 Triticodae 0.00 48 21 F4 147389 Triticeae 0.00 23 18 F5 1648030 Triticinae 0.00 5 3 G 4564 Triticum 0.00 2 2 S 4565 Triticum aestivum 0.00 4 0 F5 1648017 Hordeinae 0.00 4 0 G 4512 Hordeum 0.00 4 0 S 4513 Hordeum vulgare 0.00 4 4 S1 112509 Hordeum vulgare subsp. vulgare 0.00 2 0 F2 147367 Oryzoideae 0.00 2 0 F3 147380 Oryzeae 0.00 2 0 F4 1648021 Oryzinae 0.00 2 0 G 4527 Oryza 0.00 2 2 S 4538 Oryza glaberrima 0.00 4 0 F1 147370 PACMAD clade 0.00 4 0 F2 147369 Panicoideae 0.00 3 0 F3 1648036 Panicodae 0.00 3 0 F4 147428 Paniceae 0.00 3 0 F5 1293365 Panicinae 0.00 3 0 G 4539 Panicum 0.00 3 0 G1 2100771 Panicum sect. Hiantes 0.00 3 3 S 38727 Panicum virgatum 0.00 1 0 F3 1648033 Andropogonodae 0.00 1 0 F4 147429 Andropogoneae 0.00 1 0 F5 1648029 Tripsacinae 0.00 1 0 G 4575 Zea 0.00 1 1 S 4577 Zea mays 0.00 3 0 O 4618 Zingiberales 0.00 3 0 F 4642 Zingiberaceae 0.00 3 0 G 4650 Zingiber 0.00 3 3 S 94328 Zingiber officinale 0.00 3 0 O 73496 Asparagales 0.00 3 0 F 40552 Asparagaceae 0.00 3 0 F1 703533 Asparagoideae 0.00 3 0 G 4685 Asparagus 0.00 3 3 S 4686 Asparagus officinalis 0.00 1 0 O 40548 Dioscoreales 0.00 1 0 F 4671 Dioscoreaceae 0.00 1 0 G 4672 Dioscorea 0.00 1 0 S 29710 Dioscorea cayenensis 0.00 1 1 S1 55577 Dioscorea cayenensis subsp. rotundata 0.00 350 0 C2 71240 eudicotyledons 0.00 350 0 C3 91827 Gunneridae 0.00 350 106 C4 1437201 Pentapetalae 0.00 171 65 C5 71275 rosids 0.00 84 28 C6 91835 fabids 0.00 34 0 O 72025 Fabales 0.00 34 0 F 3803 Fabaceae 0.00 34 0 F1 3814 Papilionoideae 0.00 34 0 F2 2231393 50 kb inversion clade 0.00 34 2 F3 2231382 NPAAA clade 0.00 30 0 F4 2233855 indigoferoid/millettioid clade 0.00 30 0 F5 163735 Phaseoleae 0.00 23 0 G 3913 Vigna 0.00 20 0 S 157791 Vigna radiata 0.00 20 20 S1 3916 Vigna radiata var. radiata 0.00 3 3 S 3914 Vigna angularis 0.00 4 0 G 3846 Glycine 0.00 4 0 G1 1462606 Glycine subgen. Soja 0.00 2 2 S 3847 Glycine max 0.00 2 2 S 3848 Glycine soja 0.00 3 0 G 3820 Cajanus 0.00 3 3 S 3821 Cajanus cajan 0.00 2 0 F4 2233838 Hologalegina 0.00 2 0 F5 2233857 robinioid clade 0.00 2 0 F6 163747 Loteae 0.00 2 0 G 3867 Lotus 0.00 2 2 S 34305 Lotus japonicus 0.00 11 0 O 3646 Malpighiales 0.00 10 0 F 3977 Euphorbiaceae 0.00 10 0 F1 235631 Crotonoideae 0.00 10 0 F2 235882 Micrandreae 0.00 10 0 G 3980 Hevea 0.00 10 10 S 3981 Hevea brasiliensis 0.00 1 0 F 3688 Salicaceae 0.00 1 0 F1 238069 Saliceae 0.00 1 0 G 3689 Populus 0.00 1 1 S 3694 Populus trichocarpa 0.00 6 0 O 71239 Cucurbitales 0.00 6 0 F 3650 Cucurbitaceae 0.00 4 0 F1 1003878 Cucurbiteae 0.00 4 0 G 3660 Cucurbita 0.00 4 0 S 3663 Cucurbita pepo 0.00 4 4 S1 3664 Cucurbita pepo subsp. pepo 0.00 2 0 F1 1003877 Benincaseae 0.00 1 0 G 3655 Cucumis 0.00 1 1 S 3659 Cucumis sativus 0.00 1 0 G 102210 Benincasa 0.00 1 1 S 102211 Benincasa hispida 0.00 5 0 O 3744 Rosales 0.00 5 0 F 3745 Rosaceae 0.00 4 0 F1 171638 Rosoideae 0.00 4 0 F2 721789 Potentilleae 0.00 4 0 F3 1184124 Fragariinae 0.00 4 0 G 3746 Fragaria 0.00 4 0 S 57918 Fragaria vesca 0.00 4 4 S1 101020 Fragaria vesca subsp. vesca 0.00 1 0 F1 171637 Amygdaloideae 0.00 1 0 F2 721805 Amygdaleae 0.00 1 0 G 3754 Prunus 0.00 1 1 S 102107 Prunus mume 0.00 16 0 C6 91836 malvids 0.00 8 0 O 3699 Brassicales 0.00 8 0 F 3700 Brassicaceae 0.00 4 0 F1 980083 Camelineae 0.00 4 0 G 71323 Camelina 0.00 4 4 S 90675 Camelina sativa 0.00 4 0 F1 981071 Brassiceae 0.00 2 0 G 3705 Brassica 0.00 2 0 S 3712 Brassica oleracea 0.00 2 2 S1 109376 Brassica oleracea var. oleracea 0.00 2 0 G 3725 Raphanus 0.00 2 2 S 3726 Raphanus sativus 0.00 7 0 O 41938 Malvales 0.00 7 0 F 3629 Malvaceae 0.00 7 0 F1 214907 Malvoideae 0.00 7 0 G 3633 Gossypium 0.00 6 6 S 3635 Gossypium hirsutum 0.00 1 1 S 29730 Gossypium raimondii 0.00 1 0 O 41937 Sapindales 0.00 1 0 F 23513 Rutaceae 0.00 1 0 F1 1728959 Aurantioideae 0.00 1 0 G 2706 Citrus 0.00 1 1 S 2711 Citrus sinensis 0.00 6 0 C6 91834 rosids incertae sedis 0.00 6 0 O 403667 Vitales 0.00 6 0 F 3602 Vitaceae 0.00 6 0 F1 2304100 Viteae 0.00 6 0 G 3603 Vitis 0.00 6 6 S 96939 Vitis riparia 0.00 71 5 C5 71274 asterids 0.00 40 3 C6 91882 campanulids 0.00 34 0 O 4209 Asterales 0.00 34 16 F 4210 Asteraceae 0.00 14 0 F1 219120 Cichorioideae 0.00 14 0 F2 219121 Cichorieae 0.00 14 0 F3 745062 Lactucinae 0.00 14 0 G 4235 Lactuca 0.00 14 14 S 4236 Lactuca sativa 0.00 4 0 F1 102804 Asteroideae 0.00 4 0 F2 911341 Heliantheae alliance 0.00 4 0 F3 102814 Heliantheae 0.00 4 0 G 4231 Helianthus 0.00 4 4 S 4232 Helianthus annuus 0.00 3 0 O 4036 Apiales 0.00 3 0 O1 364270 Apiineae 0.00 3 0 F 4037 Apiaceae 0.00 3 0 F1 241778 Apioideae 0.00 3 0 F2 241789 Scandiceae 0.00 3 0 F3 241799 Daucinae 0.00 3 0 G 4038 Daucus 0.00 3 0 G1 1873447 Daucus sect. Daucus 0.00 3 0 S 4039 Daucus carota 0.00 3 3 S1 79200 Daucus carota subsp. sativus 0.00 24 0 C6 91888 lamiids 0.00 15 2 O 4143 Lamiales 0.00 11 0 F 4136 Lamiaceae 0.00 11 0 F1 216706 Nepetoideae 0.00 11 0 F2 216718 Mentheae 0.00 11 0 F3 2836339 Salviinae 0.00 11 0 G 21880 Salvia 0.00 11 0 G1 2026555 Salvia subgen. Calosphace 0.00 11 0 G2 2026556 core Calosphace 0.00 11 11 S 180675 Salvia splendens 0.00 2 0 F 4144 Oleaceae 0.00 2 0 F1 426106 Oleeae 0.00 2 0 G 4145 Olea 0.00 2 0 S 4146 Olea europaea 0.00 2 0 S1 158383 Olea europaea subsp. europaea 0.00 2 2 S2 158386 Olea europaea var. sylvestris 0.00 9 0 O 4069 Solanales 0.00 5 0 F 4070 Solanaceae 0.00 4 0 F1 424551 Solanoideae 0.00 2 0 F2 424564 Capsiceae 0.00 2 0 G 4071 Capsicum 0.00 2 2 S 4072 Capsicum annuum 0.00 2 0 F2 424574 Solaneae 0.00 2 0 G 4107 Solanum 0.00 1 0 G1 49274 Solanum subgen. Lycopersicon 0.00 1 1 S 28526 Solanum pennellii 0.00 1 1 S 172797 Solanum stenotomum 0.00 1 0 F1 424554 Nicotianoideae 0.00 1 0 F2 424562 Nicotianeae 0.00 1 0 G 4085 Nicotiana 0.00 1 1 S 49451 Nicotiana attenuata 0.00 4 0 F 4118 Convolvulaceae 0.00 4 0 F1 267213 Ipomoeeae 0.00 4 0 G 4119 Ipomoea 0.00 4 4 S 35885 Ipomoea triloba 0.00 2 0 O 41945 Ericales 0.00 2 0 F 19955 Ebenaceae 0.00 2 0 G 13492 Diospyros 0.00 2 2 S 55363 Diospyros lotus 0.00 1 0 O 3524 Caryophyllales 0.00 1 0 F 1804623 Chenopodiaceae 0.00 1 0 F1 1307796 Chenopodioideae 0.00 1 0 F2 1307775 Anserineae 0.00 1 0 G 3561 Spinacia 0.00 1 1 S 3562 Spinacia oleracea 0.00 1 0 O 41947 Santalales 0.00 1 0 F 1003242 Ximeniaceae 0.00 1 0 G 397391 Malania 0.00 1 1 S 397392 Malania oleifera 0.00 13 0 O 232378 Proteales 0.00 13 0 F 4328 Proteaceae 0.00 10 0 G 4329 Macadamia 0.00 10 10 S 60698 Macadamia integrifolia 0.00 3 0 G 54954 Telopea 0.00 3 3 S 54955 Telopea speciosissima 0.00 3 0 C2 232347 Magnoliidae 0.00 3 0 O 3400 Magnoliales 0.00 3 0 F 3401 Magnoliaceae 0.00 3 0 G 3402 Magnolia 0.00 3 3 S 86752 Magnolia sinica 0.00 2 0 P3 3208 Bryophyta 0.00 2 0 P4 404260 Bryophytina 0.00 2 0 C 3214 Bryopsida 0.00 2 0 C1 114656 Funariidae 0.00 2 0 O 3215 Funariales 0.00 2 0 F 3216 Funariaceae 0.00 2 0 G 37414 Physcomitrium 0.00 2 2 S 3218 Physcomitrium patens 0.00 20 18 P 3041 Chlorophyta 0.00 2 0 P1 2692248 core chlorophytes 0.00 2 0 C 3166 Chlorophyceae 0.00 2 0 C1 2812636 CS clade 0.00 2 0 O 3042 Chlamydomonadales 0.00 2 0 F 3051 Chlamydomonadaceae 0.00 2 0 G 3052 Chlamydomonas 0.00 2 2 S 3055 Chlamydomonas reinhardtii